Research Projects

AI models for in silico proteome prediction

Centre for Genomic Regulation (CRG)

Barcelona

Spain
Confidence prediction of fine-tuned AI peptide property models for single-cell proteomics data analysis

Technical University of Munich (TUM)

Munich

Germany
Systematic detection and structural characterization of functional proteoform groups

University Hospital Heidelberg (UKHD)

Heidelberg

Germany
Solving molecular biology with massive data generation and AI

Wellcome Sanger Institute GENOME RESEARCH LIMITED (SANGER)

Cambridge

United Kingdom
Expanding the small molecule repertoire towards precision drugs through AI generative models

Institute for Research in Biomedicine (IRB)

Barcelona

Spain
Integration of multi-omic data into subcellular spatial proteomics cell models

THE CHANCELLOR, MASTERS AND SCHOLARS OF THE UNIVERSITY OF CAMBRIDGE (UCAM)

Cambridge

United Kingdom
Knowledge-assisted prediction of clinical outcomes from proteomics data

EUROPEAN MOLECULAR BIOLOGY LABORATORY (EMBL-EBI)

Cambridge

United Kingdom
Development of a Federated Graph-based Representation Learning Framework to Aid Integration and Interpretation of Proteomics Data

Technical University of Denmark (DTU)

Copenhagen

Denmark
AI-powered proteomics against antibiotic resistance

Universitat Pompeu Fabra (UPF)

Barcelona

Spain
Bringing AI to the machine through real-time instrument control: towards intelligent acquisition methods tailored for single-cell proteomics

Institute of Pharmacology and Structural Biology (IPBS, CNRS)

Toulouse

France
AI-assisted protein-protein interaction interface clustering and discovery of novel modes of protein binding

Institute of Molecular Biology (IMB)

MAINZ

Germany
Enhancing Spectrum Clarity: A Neural Network Approach for Signal-Noise Discrimination in DIA MS2 Data

University of Applied Sciences Upper Austria (FHOOE)

Hagenberg

Austria
Assessing identification and quantification errors in mass spectrometry-based proteomics

KTH Royal Institute of Technology

STOCKHOLM

Sweden
AI-powered Healthcare: Patient Trust, Engagement, and Ethics

Tampere University (TAU)

TAMPERE

Finland
Structural characterization of proteins and protein complexes by hydrogen-deuterium exchange and hydroxyl radical footprinting

Institute of Microbiology of the Czech Academy of Sciences (BIOCEV)

Prague

Czech Republic
Combining structures and proteomic data to study protein pocket binding potential

Federal Institute of Technology Zurich (ETZH)

Zurich

Switzerland